Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGN1P05114 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGN1P05114 AC104076.2-201ENST00000448912 469 ntBASIC15.33■□□□□ 0.04
HMGN1P05114 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 AL136038.3-201ENST00000561909 1096 ntBASIC15.33■□□□□ 0.04
HMGN1P05114 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGN1P05114 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGN1P05114 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGN1P05114 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 TCAF2P1-201ENST00000291129 2421 ntBASIC15.33■□□□□ 0.04
HMGN1P05114 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGN1P05114 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGN1P05114 ME2P1-201ENST00000426028 1970 ntBASIC15.33■□□□□ 0.04
HMGN1P05114 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HMGN1P05114 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGN1P05114 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 AL020989.1-201ENST00000422979 469 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGN1P05114 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGN1P05114 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
HMGN1P05114 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
HMGN1P05114 AC022616.7-201ENST00000525383 220 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGN1P05114 DUX4L17-201ENST00000557360 1267 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.32■□□□□ 0.04
HMGN1P05114 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGN1P05114 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 AL139011.1-202ENST00000642063 584 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 ALOX12P2-203ENST00000570921 1945 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGN1P05114 AC092364.2-201ENST00000596710 2692 ntBASIC15.32■□□□□ 0.04
HMGN1P05114 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGN1P05114 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMGN1P05114 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGN1P05114 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGN1P05114 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGN1P05114 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGN1P05114 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGN1P05114 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGN1P05114 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGN1P05114 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.31■□□□□ 0.04
HMGN1P05114 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGN1P05114 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGN1P05114 AL121672.3-201ENST00000608644 468 ntBASIC15.31■□□□□ 0.04
HMGN1P05114 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMGN1P05114 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMGN1P05114 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HMGN1P05114 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGN1P05114 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms