Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 RN7SL589P-201ENST00000481268 310 ntBASIC16.74■□□□□ 0.27
PCDHGA12O60330 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 MIR4745-201ENST00000577608 62 ntBASIC16.74■□□□□ 0.27
PCDHGA12O60330 AC138761.1-201ENST00000584393 385 ntBASIC16.74■□□□□ 0.27
PCDHGA12O60330 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 AC099522.2-201ENST00000607001 744 ntBASIC16.74■□□□□ 0.27
PCDHGA12O60330 AJ011932.1-201ENST00000621707 465 ntBASIC16.74■□□□□ 0.27
PCDHGA12O60330 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGA12O60330 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGA12O60330 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 SPDYE11-202ENST00000450699 704 ntBASIC16.73■□□□□ 0.27
PCDHGA12O60330 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 AL512356.2-201ENST00000546955 174 ntBASIC16.73■□□□□ 0.27
PCDHGA12O60330 SPDYE9P-201ENST00000570642 692 ntBASIC16.73■□□□□ 0.27
PCDHGA12O60330 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 SPDYE10P-202ENST00000612005 668 ntBASIC16.73■□□□□ 0.27
PCDHGA12O60330 SPDYE8P-202ENST00000612377 668 ntBASIC16.73■□□□□ 0.27
PCDHGA12O60330 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGA12O60330 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGA12O60330 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AP001094.4-201ENST00000579008 2176 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms