Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC28A2O43868 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC28A2O43868 AC069262.1-201ENST00000539058 672 ntBASIC16.3■□□□□ 0.2
SLC28A2O43868 AC109462.3-201ENST00000573934 613 ntBASIC16.3■□□□□ 0.2
SLC28A2O43868 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC28A2O43868 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 AC116353.5-201ENST00000638148 1699 ntBASIC16.3■□□□□ 0.2
SLC28A2O43868 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC28A2O43868 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC28A2O43868 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC28A2O43868 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC28A2O43868 AC006557.2-201ENST00000592985 1240 ntBASIC16.29■□□□□ 0.2
SLC28A2O43868 AP000867.4-201ENST00000641616 219 ntBASIC16.29■□□□□ 0.2
SLC28A2O43868 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC28A2O43868 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC28A2O43868 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC28A2O43868 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 AC084018.2-201ENST00000613093 2607 ntBASIC16.29■□□□□ 0.2
SLC28A2O43868 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC28A2O43868 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A2O43868 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 CRYGEP-201ENST00000412192 528 ntBASIC16.28■□□□□ 0.2
SLC28A2O43868 AC015922.1-201ENST00000421102 1152 ntBASIC16.28■□□□□ 0.2
SLC28A2O43868 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A2O43868 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC28A2O43868 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC28A2O43868 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A2O43868 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
SLC28A2O43868 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC28A2O43868 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC28A2O43868 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC28A2O43868 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC28A2O43868 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms