Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.48■□□□□ 0.39
MSI1O43347 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MSI1O43347 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
MSI1O43347 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.48■□□□□ 0.39
MSI1O43347 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.48■□□□□ 0.39
MSI1O43347 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.48■□□□□ 0.39
MSI1O43347 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.48■□□□□ 0.39
MSI1O43347 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MSI1O43347 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.48■□□□□ 0.39
MSI1O43347 AC005829.1-201ENST00000570002 483 ntBASIC17.48■□□□□ 0.39
MSI1O43347 MIR4469-201ENST00000583919 79 ntBASIC17.48■□□□□ 0.39
MSI1O43347 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
MSI1O43347 CYP2A7P1-201ENST00000595391 815 ntBASIC17.48■□□□□ 0.39
MSI1O43347 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
MSI1O43347 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
MSI1O43347 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 AL671710.1-201ENST00000610245 2349 ntBASIC17.48■□□□□ 0.39
MSI1O43347 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.48■□□□□ 0.39
MSI1O43347 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MSI1O43347 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MSI1O43347 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MSI1O43347 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.47■□□□□ 0.39
MSI1O43347 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 AC140658.5-201ENST00000438532 169 ntBASIC17.47■□□□□ 0.39
MSI1O43347 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
MSI1O43347 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.47■□□□□ 0.39
MSI1O43347 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.47■□□□□ 0.39
MSI1O43347 GPALPP1-207ENST00000611650 899 ntBASIC17.47■□□□□ 0.39
MSI1O43347 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 AC092902.6-201ENST00000641783 218 ntBASIC17.47■□□□□ 0.39
MSI1O43347 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MSI1O43347 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MSI1O43347 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 RNF216P1-203ENST00000404404 2427 ntBASIC17.47■□□□□ 0.39
MSI1O43347 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
MSI1O43347 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
MSI1O43347 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MSI1O43347 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
MSI1O43347 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.46■□□□□ 0.39
MSI1O43347 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.46■□□□□ 0.39
MSI1O43347 AL691403.2-201ENST00000618460 490 ntBASIC17.46■□□□□ 0.39
MSI1O43347 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MSI1O43347 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MSI1O43347 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.46■□□□□ 0.39
MSI1O43347 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms