Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 TDH-203ENST00000531764 1110 ntBASIC20.94■□□□□ 0.94
RGPD3A6NKT7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.94■□□□□ 0.94
RGPD3A6NKT7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 KRT8P22-201ENST00000562317 1415 ntBASIC20.93■□□□□ 0.94
RGPD3A6NKT7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 AL355864.2-201ENST00000447420 863 ntBASIC20.93■□□□□ 0.94
RGPD3A6NKT7 RPL13AP20-201ENST00000459725 609 ntBASIC20.93■□□□□ 0.94
RGPD3A6NKT7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.93■□□□□ 0.94
RGPD3A6NKT7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AC091804.1-201ENST00000486888 567 ntBASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AC013467.2-201ENST00000605472 835 ntBASIC20.92■□□□□ 0.94
RGPD3A6NKT7 RHOXF1P1-202ENST00000635473 501 ntBASIC20.92■□□□□ 0.94
RGPD3A6NKT7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RGPD3A6NKT7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 SLC25A24P2-201ENST00000415059 510 ntBASIC20.91■□□□□ 0.94
RGPD3A6NKT7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 PTP4A1P2-201ENST00000546033 454 ntBASIC20.91■□□□□ 0.94
RGPD3A6NKT7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 Z97205.2-201ENST00000564697 1639 ntBASIC20.91■□□□□ 0.94
RGPD3A6NKT7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RGPD3A6NKT7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.9■□□□□ 0.94
RGPD3A6NKT7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RGPD3A6NKT7 INTS4P2-202ENST00000614726 2019 ntBASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms