Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC004877.2-201ENST00000623941 599 ntBASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC010507.1-201ENST00000633895 436 ntBASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AL121761.2-201ENST00000598007 1648 ntBASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AC100803.2-201ENST00000562459 1963 ntBASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 OR7E47P-204ENST00000575924 449 ntBASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 AL078644.1-201ENST00000609881 752 ntBASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGA3Q9Y5H0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CEND1P1-201ENST00000451006 455 ntBASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 RFPL4AP1-201ENST00000530883 850 ntBASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 KRT19P2-202ENST00000557173 1012 ntBASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 AC007064.4-201ENST00000637740 555 ntBASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGA3Q9Y5H0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms