Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NXF3Q9H4D5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 GPS2P2-201ENST00000430745 888 ntBASIC18.15■□□□□ 0.5
NXF3Q9H4D5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NXF3Q9H4D5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
NXF3Q9H4D5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AC006277.1-201ENST00000624348 1610 ntBASIC18.14■□□□□ 0.49
NXF3Q9H4D5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 IGHV3-62-201ENST00000520057 340 ntBASIC18.14■□□□□ 0.49
NXF3Q9H4D5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NXF3Q9H4D5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 UXT-AS1-201ENST00000590504 1525 ntBASIC18.13■□□□□ 0.49
NXF3Q9H4D5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 AC025678.2-201ENST00000562061 970 ntBASIC18.13■□□□□ 0.49
NXF3Q9H4D5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms