Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN18Q99952 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
PTPN18Q99952 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN18Q99952 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN18Q99952 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN18Q99952 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN18Q99952 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN18Q99952 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN18Q99952 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN18Q99952 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PTPN18Q99952 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.11■□□□□ 0.65
PTPN18Q99952 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 AC055876.2-201ENST00000531834 546 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 AC023310.3-201ENST00000557027 670 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 AC100756.1-201ENST00000562736 682 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 AC138749.3-201ENST00000567691 622 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 MIR4525-201ENST00000580000 75 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPN18Q99952 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.11■□□□□ 0.65
PTPN18Q99952 AC099568.2-201ENST00000609194 695 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 AC116165.1-201ENST00000611806 668 ntBASIC19.11■□□□□ 0.65
PTPN18Q99952 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
PTPN18Q99952 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN18Q99952 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPN18Q99952 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PTPN18Q99952 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPN18Q99952 AL589987.1-201ENST00000453380 819 ntBASIC19.1■□□□□ 0.65
PTPN18Q99952 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPN18Q99952 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTPN18Q99952 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 AC004461.2-201ENST00000629517 803 ntBASIC19.1■□□□□ 0.65
PTPN18Q99952 AC108860.2-201ENST00000562760 2183 ntBASIC19.1■□□□□ 0.65
PTPN18Q99952 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPN18Q99952 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPN18Q99952 AL671710.1-201ENST00000610245 2349 ntBASIC19.09■□□□□ 0.65
PTPN18Q99952 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN18Q99952 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN18Q99952 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN18Q99952 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN18Q99952 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPN18Q99952 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.09■□□□□ 0.65
PTPN18Q99952 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.09■□□□□ 0.65
PTPN18Q99952 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPN18Q99952 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PTPN18Q99952 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPN18Q99952 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPN18Q99952 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PTPN18Q99952 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms