Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CU639417.3-201ENST00000624240 1404 ntBASIC18.22■□□□□ 0.51
HERC6Q8IVU3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SPTLC1P1-201ENST00000447199 261 ntBASIC18.21■□□□□ 0.51
HERC6Q8IVU3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 LINC01451-201ENST00000623792 534 ntBASIC18.21■□□□□ 0.51
HERC6Q8IVU3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC6Q8IVU3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HERC6Q8IVU3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 ARSEP1-201ENST00000420443 635 ntBASIC18.2■□□□□ 0.5
HERC6Q8IVU3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AC018529.1-201ENST00000613063 361 ntBASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SPDYE12P-201ENST00000618416 771 ntBASIC18.2■□□□□ 0.5
HERC6Q8IVU3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC6Q8IVU3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 AC016027.1-202ENST00000607927 1699 ntBASIC18.19■□□□□ 0.5
HERC6Q8IVU3 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.19■□□□□ 0.5
HERC6Q8IVU3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.19■□□□□ 0.5
HERC6Q8IVU3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms