Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19■□□□□ 0.63
EPHB4P54760 AC109462.3-201ENST00000573934 613 ntBASIC19■□□□□ 0.63
EPHB4P54760 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19■□□□□ 0.63
EPHB4P54760 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19■□□□□ 0.63
EPHB4P54760 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19■□□□□ 0.63
EPHB4P54760 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19■□□□□ 0.63
EPHB4P54760 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19■□□□□ 0.63
EPHB4P54760 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19■□□□□ 0.63
EPHB4P54760 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19■□□□□ 0.63
EPHB4P54760 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19■□□□□ 0.63
EPHB4P54760 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
EPHB4P54760 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHB4P54760 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19■□□□□ 0.63
EPHB4P54760 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.99■□□□□ 0.63
EPHB4P54760 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
EPHB4P54760 FAM185BP-201ENST00000443595 716 ntBASIC18.99■□□□□ 0.63
EPHB4P54760 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.99■□□□□ 0.63
EPHB4P54760 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.99■□□□□ 0.63
EPHB4P54760 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB4P54760 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 PI4KAP1-204ENST00000612579 1703 ntBASIC18.99■□□□□ 0.63
EPHB4P54760 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB4P54760 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB4P54760 AL118508.1-201ENST00000613502 2345 ntBASIC18.99■□□□□ 0.63
EPHB4P54760 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
EPHB4P54760 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB4P54760 BASP1P1-201ENST00000430708 665 ntBASIC18.98■□□□□ 0.63
EPHB4P54760 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB4P54760 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 STK25P1-201ENST00000585406 838 ntBASIC18.98■□□□□ 0.63
EPHB4P54760 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
EPHB4P54760 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB4P54760 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB4P54760 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB4P54760 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
EPHB4P54760 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
EPHB4P54760 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
EPHB4P54760 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB4P54760 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.97■□□□□ 0.63
EPHB4P54760 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms