Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 PMS2P7-201ENST00000506558 1336 ntBASIC17.05■□□□□ 0.32
LIMK2P53671 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
LIMK2P53671 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LIMK2P53671 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.05■□□□□ 0.32
LIMK2P53671 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.05■□□□□ 0.32
LIMK2P53671 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.05■□□□□ 0.32
LIMK2P53671 DUX4L17-201ENST00000557360 1267 ntBASIC17.05■□□□□ 0.32
LIMK2P53671 AC012640.2-201ENST00000561606 901 ntBASIC17.05■□□□□ 0.32
LIMK2P53671 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.05■□□□□ 0.32
LIMK2P53671 AC008735.5-201ENST00000623544 497 ntBASIC17.05■□□□□ 0.32
LIMK2P53671 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.05■□□□□ 0.32
LIMK2P53671 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIMK2P53671 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
LIMK2P53671 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 AC079776.2-201ENST00000641154 1609 ntBASIC17.04■□□□□ 0.32
LIMK2P53671 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.04■□□□□ 0.32
LIMK2P53671 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LIMK2P53671 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 AC092910.1-201ENST00000482027 1129 ntBASIC17.04■□□□□ 0.32
LIMK2P53671 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.04■□□□□ 0.32
LIMK2P53671 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.04■□□□□ 0.32
LIMK2P53671 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.04■□□□□ 0.32
LIMK2P53671 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
LIMK2P53671 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LIMK2P53671 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LIMK2P53671 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LIMK2P53671 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LIMK2P53671 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
LIMK2P53671 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.03■□□□□ 0.32
LIMK2P53671 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LIMK2P53671 MIR940-201ENST00000401276 94 ntBASIC17.03■□□□□ 0.32
LIMK2P53671 AC098831.1-202ENST00000438821 336 ntBASIC17.03■□□□□ 0.32
LIMK2P53671 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.03■□□□□ 0.32
LIMK2P53671 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.03■□□□□ 0.32
LIMK2P53671 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.03■□□□□ 0.32
LIMK2P53671 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LIMK2P53671 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms