Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIK1P39086 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
GRIK1P39086 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIK1P39086 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIK1P39086 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GRIK1P39086 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.77■□□□□ 0.44
GRIK1P39086 TUBB8P12-201ENST00000308911 1335 ntBASIC17.77■□□□□ 0.44
GRIK1P39086 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 TUBB7P-202ENST00000428444 1305 ntBASIC17.77■□□□□ 0.44
GRIK1P39086 TUBB8P7-204ENST00000567960 1332 ntBASIC17.77■□□□□ 0.44
GRIK1P39086 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.77■□□□□ 0.44
GRIK1P39086 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GRIK1P39086 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.77■□□□□ 0.44
GRIK1P39086 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIK1P39086 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIK1P39086 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.77■□□□□ 0.44
GRIK1P39086 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.77■□□□□ 0.44
GRIK1P39086 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GRIK1P39086 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIK1P39086 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIK1P39086 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.77■□□□□ 0.44
GRIK1P39086 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GRIK1P39086 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.77■□□□□ 0.43
GRIK1P39086 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
GRIK1P39086 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GRIK1P39086 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
GRIK1P39086 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
GRIK1P39086 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
GRIK1P39086 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
GRIK1P39086 CNN2P11-201ENST00000429351 262 ntBASIC17.76■□□□□ 0.43
GRIK1P39086 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GRIK1P39086 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.76■□□□□ 0.43
GRIK1P39086 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
GRIK1P39086 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GRIK1P39086 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GRIK1P39086 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
GRIK1P39086 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GRIK1P39086 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GRIK1P39086 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GRIK1P39086 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GRIK1P39086 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GRIK1P39086 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.75■□□□□ 0.43
GRIK1P39086 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 AL671277.1-201ENST00000429656 993 ntBASIC17.75■□□□□ 0.43
GRIK1P39086 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.75■□□□□ 0.43
GRIK1P39086 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GRIK1P39086 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GRIK1P39086 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.75■□□□□ 0.43
GRIK1P39086 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.75■□□□□ 0.43
GRIK1P39086 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
GRIK1P39086 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.75■□□□□ 0.43
GRIK1P39086 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.75■□□□□ 0.43
GRIK1P39086 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
GRIK1P39086 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.75■□□□□ 0.43
GRIK1P39086 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GRIK1P39086 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms