Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDE6BP35913 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PDE6BP35913 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE6BP35913 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE6BP35913 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE6BP35913 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6BP35913 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6BP35913 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6BP35913 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6BP35913 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE6BP35913 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PDE6BP35913 ACA64.2-201ENST00000459014 129 ntBASIC20.61■□□□□ 0.89
PDE6BP35913 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 AC093004.1-201ENST00000508850 424 ntBASIC20.61■□□□□ 0.89
PDE6BP35913 RNA5SP410-201ENST00000516285 106 ntBASIC20.61■□□□□ 0.89
PDE6BP35913 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PDE6BP35913 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE6BP35913 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE6BP35913 AC132938.2-201ENST00000579188 680 ntBASIC20.61■□□□□ 0.89
PDE6BP35913 AL591163.1-201ENST00000641757 987 ntBASIC20.61■□□□□ 0.89
PDE6BP35913 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE6BP35913 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE6BP35913 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6BP35913 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE6BP35913 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 RPS2P32-201ENST00000439199 892 ntBASIC20.6■□□□□ 0.89
PDE6BP35913 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE6BP35913 AC106886.1-201ENST00000568660 600 ntBASIC20.6■□□□□ 0.89
PDE6BP35913 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.6■□□□□ 0.89
PDE6BP35913 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PDE6BP35913 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
PDE6BP35913 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDE6BP35913 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE6BP35913 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 BICD1-207ENST00000551848 1962 ntBASIC20.59■□□□□ 0.89
PDE6BP35913 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PDE6BP35913 SPDYE19P-201ENST00000338590 713 ntBASIC20.59■□□□□ 0.89
PDE6BP35913 AC079776.1-201ENST00000401540 1152 ntBASIC20.59■□□□□ 0.89
PDE6BP35913 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6BP35913 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 DOC2GP-202ENST00000514950 1163 ntBASIC20.59■□□□□ 0.89
PDE6BP35913 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6BP35913 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.59■□□□□ 0.89
PDE6BP35913 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.59■□□□□ 0.89
PDE6BP35913 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6BP35913 MIR6805-201ENST00000615055 62 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms