Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.285e-8■■□□□ 14.3
RPS3P23396 OTUD5-205ENST00000455452 2077 ntTSL 520.23■□□□□ 0.835e-8■■□□□ 14.3
RPS3P23396 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.17■□□□□ 0.345e-8■■□□□ 14.3
RPS3P23396 SLC35F5-212ENST00000498768 1711 ntTSL 1 (best)22.27■■□□□ 1.161e-6■■□□□ 14.3
RPS3P23396 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.11■□□□□ 0.971e-6■■□□□ 14.3
RPS3P23396 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-6■■□□□ 14.3
RPS3P23396 SLC35F5-202ENST00000409106 3120 ntTSL 215.9■□□□□ 0.141e-6■■□□□ 14.3
RPS3P23396 NPTN-208ENST00000565282 1247 ntTSL 1 (best)16.42■□□□□ 0.222e-11■■□□□ 14.3
RPS3P23396 PROC-207ENST00000431364 566 ntTSL 411.99□□□□□ -0.494e-11■■□□□ 14.3
RPS3P23396 PROC-205ENST00000427769 598 ntTSL 411.59□□□□□ -0.554e-11■■□□□ 14.3
RPS3P23396 PROC-210ENST00000474030 501 ntTSL 410.8□□□□□ -0.684e-11■■□□□ 14.3
RPS3P23396 FDFT1-216ENST00000529521 418 ntTSL 22.41□□□□□ -2.021e-19■■□□□ 14.3
RPS3P23396 FUS-203ENST00000474990 827 ntTSL 321.71■■□□□ 1.071e-18■■□□□ 14.3
RPS3P23396 FADS2-208ENST00000521571 799 ntTSL 36.95□□□□□ -1.31e-12■■□□□ 14.3
RPS3P23396 FBXO2-202ENST00000465901 434 ntTSL 320.75■□□□□ 0.912e-9■■□□□ 14.3
RPS3P23396 GLDC-215ENST00000639493 553 ntTSL 310.17□□□□□ -0.783e-7■■□□□ 14.3
RPS3P23396 GLDC-207ENST00000638654 626 ntTSL 38.96□□□□□ -0.983e-7■■□□□ 14.3
RPS3P23396 RPS4Y1-203ENST00000477725 998 ntTSL 25.69□□□□□ -1.52e-6■■□□□ 14.3
RPS3P23396 RPS4Y1-202ENST00000430575 811 ntTSL 35.41□□□□□ -1.542e-6■■□□□ 14.3
RPS3P23396 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.82e-6■■□□□ 14.3
RPS3P23396 PLOD3-202ENST00000414785 539 ntTSL 515.64■□□□□ 0.093e-9■■□□□ 14.3
RPS3P23396 PRPF8-213ENST00000576407 566 ntTSL 28.42□□□□□ -1.061e-13■■□□□ 14.3
RPS3P23396 SERPINF1-208ENST00000572517 672 ntTSL 211.2□□□□□ -0.624e-24■■□□□ 14.3
RPS3P23396 SUN2-216ENST00000477262 914 ntTSL 315.08■□□□□ 01e-7■■□□□ 14.3
RPS3P23396 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.334e-8■■□□□ 14.3
RPS3P23396 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.756e-7■■□□□ 14.3
RPS3P23396 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.186e-7■■□□□ 14.3
RPS3P23396 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.556e-7■■□□□ 14.3
RPS3P23396 GRB2-208ENST00000578961 687 ntTSL 3 BASIC10.23□□□□□ -0.772e-6■■□□□ 14.3
RPS3P23396 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.872e-6■■□□□ 14.3
RPS3P23396 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.75□□□□□ -1.171e-6■■□□□ 14.3
RPS3P23396 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.21e-6■■□□□ 14.3
RPS3P23396 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.75□□□□□ -1.331e-6■■□□□ 14.3
RPS3P23396 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.421e-6■■□□□ 14.3
RPS3P23396 AP2B1-219ENST00000620039 3428 ntTSL 1 (best)5.57□□□□□ -1.521e-6■■□□□ 14.3
RPS3P23396 MCM7-204ENST00000425308 1497 ntTSL 327.75■■■□□ 2.032e-7■■□□□ 14.3
RPS3P23396 DDX5-206ENST00000578190 582 ntTSL 37.55□□□□□ -1.25e-24■■□□□ 14.3
RPS3P23396 MARS-205ENST00000546481 561 ntTSL 322.06■■□□□ 1.121e-10■■□□□ 14.3
RPS3P23396 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.97■□□□□ 0.791e-10■■□□□ 14.3
RPS3P23396 MARS-207ENST00000547062 571 ntTSL 219.91■□□□□ 0.781e-10■■□□□ 14.3
RPS3P23396 MARS-214ENST00000548714 567 ntTSL 219.29■□□□□ 0.681e-10■■□□□ 14.3
RPS3P23396 MARS-225ENST00000551842 662 ntTSL 218.41■□□□□ 0.541e-10■■□□□ 14.3
RPS3P23396 RPS14-206ENST00000519855 398 ntTSL 213.03□□□□□ -0.321e-38■■□□□ 14.3
RPS3P23396 PLXNB2-202ENST00000411680 704 ntTSL 216.43■□□□□ 0.221e-9■■□□□ 14.3
RPS3P23396 ZNHIT1-202ENST00000461205 571 ntTSL 39.89□□□□□ -0.831e-12■■□□□ 14.3
RPS3P23396 HPN-207ENST00000599363 1828 ntTSL 521.13■□□□□ 0.974e-8■■□□□ 14.3
RPS3P23396 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.324e-8■■□□□ 14.3
RPS3P23396 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.184e-8■■□□□ 14.3
RPS3P23396 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.023e-6■■□□□ 14.3
RPS3P23396 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.96□□□□□ -0.174e-8■■□□□ 14.3
RPS3P23396 ACSM3-209ENST00000564701 756 ntTSL 38.8□□□□□ -11e-8■■□□□ 14.3
RPS3P23396 GLG1-210ENST00000565474 601 ntTSL 43.33□□□□□ -1.882e-6■■□□□ 14.3
RPS3P23396 EIF3G-211ENST00000590940 762 ntTSL 39.68□□□□□ -0.862e-8■■□□□ 14.2
RPS3P23396 EIF3G-204ENST00000587681 537 ntTSL 27.08□□□□□ -1.282e-8■■□□□ 14.2
RPS3P23396 EIF1B-203ENST00000487151 632 ntTSL 22.36□□□□□ -2.031e-22■■□□□ 14.2
RPS3P23396 HNRNPL-208ENST00000600233 659 ntTSL 514.36□□□□□ -0.114e-9■■□□□ 14.2
RPS3P23396 PLOD3-207ENST00000456079 563 ntTSL 414.5□□□□□ -0.093e-9■■□□□ 14.2
RPS3P23396 SLC5A6-204ENST00000412471 917 ntTSL 528.48■■■□□ 2.152e-11■■□□□ 14.2
RPS3P23396 SLC5A6-206ENST00000426119 676 ntTSL 322.59■■□□□ 1.212e-11■■□□□ 14.2
RPS3P23396 SLC5A6-202ENST00000401463 732 ntTSL 313.51□□□□□ -0.252e-11■■□□□ 14.2
RPS3P23396 SLC5A6-211ENST00000445802 871 ntTSL 511.02□□□□□ -0.652e-11■■□□□ 14.2
RPS3P23396 DHRS2-206ENST00000556550 2595 nt13.95□□□□□ -0.182e-34■■□□□ 14.2
RPS3P23396 DDX5-224ENST00000583239 474 ntTSL 411.24□□□□□ -0.615e-24■■□□□ 14.2
RPS3P23396 DDX5-211ENST00000579091 531 ntTSL 46.5□□□□□ -1.375e-24■■□□□ 14.2
RPS3P23396 DDX5-223ENST00000583212 543 ntTSL 44.73□□□□□ -1.655e-24■■□□□ 14.2
RPS3P23396 SEPT2-244ENST00000495463 501 ntTSL 427.86■■■□□ 2.054e-11■■□□□ 14.2
RPS3P23396 SEPT2-234ENST00000475474 749 ntTSL 225.34■■□□□ 1.654e-11■■□□□ 14.2
RPS3P23396 SEPT2-238ENST00000482304 740 ntTSL 224.48■■□□□ 1.514e-11■■□□□ 14.2
RPS3P23396 SEPT2-227ENST00000462147 576 ntTSL 423.91■■□□□ 1.424e-11■■□□□ 14.2
RPS3P23396 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.93■■□□□ 1.264e-11■■□□□ 14.2
RPS3P23396 SEPT2-229ENST00000466211 584 ntTSL 322.08■■□□□ 1.134e-11■■□□□ 14.2
RPS3P23396 SEPT2-216ENST00000434955 480 ntTSL 322.04■■□□□ 1.124e-11■■□□□ 14.2
RPS3P23396 SEPT2-209ENST00000411484 561 ntTSL 421.23■□□□□ 0.994e-11■■□□□ 14.2
RPS3P23396 SEPT2-217ENST00000436795 775 ntTSL 521.12■□□□□ 0.974e-11■■□□□ 14.2
RPS3P23396 SEPT2-243ENST00000494824 565 ntTSL 520.55■□□□□ 0.884e-11■■□□□ 14.2
RPS3P23396 SEPT2-231ENST00000469175 486 ntTSL 320.33■□□□□ 0.854e-11■■□□□ 14.2
RPS3P23396 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.574e-11■■□□□ 14.2
RPS3P23396 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18■□□□□ 0.474e-11■■□□□ 14.2
RPS3P23396 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.06■□□□□ 0.324e-11■■□□□ 14.2
RPS3P23396 SEPT2-218ENST00000437066 574 ntTSL 417.02■□□□□ 0.324e-11■■□□□ 14.2
RPS3P23396 SEPT2-213ENST00000428282 1005 ntTSL 316.71■□□□□ 0.274e-11■■□□□ 14.2
RPS3P23396 SEPT2-242ENST00000492978 775 ntTSL 316.71■□□□□ 0.274e-11■■□□□ 14.2
RPS3P23396 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.534e-11■■□□□ 14.2
RPS3P23396 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-11■■□□□ 14.2
RPS3P23396 SEPT2-235ENST00000475823 371 ntTSL 310.67□□□□□ -0.74e-11■■□□□ 14.2
RPS3P23396 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.894e-11■■□□□ 14.2
RPS3P23396 SEPT2-224ENST00000457335 570 ntTSL 49.35□□□□□ -0.914e-11■■□□□ 14.2
RPS3P23396 SEPT2-212ENST00000425899 738 ntTSL 59.19□□□□□ -0.944e-11■■□□□ 14.2
RPS3P23396 SEPT2-230ENST00000467971 571 ntTSL 28.35□□□□□ -1.074e-11■■□□□ 14.2
RPS3P23396 SEPT2-202ENST00000366210 672 ntTSL 38.26□□□□□ -1.094e-11■■□□□ 14.2
RPS3P23396 SEPT2-207ENST00000407017 650 ntTSL 47.13□□□□□ -1.274e-11■■□□□ 14.2
RPS3P23396 SEPT2-221ENST00000445030 575 ntTSL 37.13□□□□□ -1.274e-11■■□□□ 14.2
RPS3P23396 SEPT2-219ENST00000441533 372 ntTSL 56.58□□□□□ -1.364e-11■■□□□ 14.2
RPS3P23396 SEPT2-220ENST00000443492 558 ntTSL 55.86□□□□□ -1.474e-11■■□□□ 14.2
RPS3P23396 SEPT2-241ENST00000484740 563 ntTSL 35.59□□□□□ -1.514e-11■■□□□ 14.2
RPS3P23396 SEPT2-222ENST00000449239 599 ntTSL 25.1□□□□□ -1.594e-11■■□□□ 14.2
RPS3P23396 SEPT2-232ENST00000469434 583 ntTSL 33.94□□□□□ -1.784e-11■■□□□ 14.2
RPS3P23396 SEPT2-228ENST00000464128 565 ntTSL 43.38□□□□□ -1.874e-11■■□□□ 14.2
RPS3P23396 SEPT2-233ENST00000473479 659 ntTSL 22.93□□□□□ -1.944e-11■■□□□ 14.2
RPS3P23396 STIP1-210ENST00000540887 877 ntTSL 215.22■□□□□ 0.031e-7■■□□□ 14.2
Retrieved 100 of 24,271 protein–RNA pairs in 178.5 ms