Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
COL5A1P20908 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL5A1P20908 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.99■□□□□ 0.15
COL5A1P20908 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COL5A1P20908 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL5A1P20908 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.98■□□□□ 0.15
COL5A1P20908 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.98■□□□□ 0.15
COL5A1P20908 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.98■□□□□ 0.15
COL5A1P20908 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.98■□□□□ 0.15
COL5A1P20908 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.98■□□□□ 0.15
COL5A1P20908 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.98■□□□□ 0.15
COL5A1P20908 AL589739.1-201ENST00000607720 493 ntBASIC15.98■□□□□ 0.15
COL5A1P20908 AC017083.2-201ENST00000608069 979 ntBASIC15.98■□□□□ 0.15
COL5A1P20908 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL5A1P20908 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 AL512361.1-201ENST00000554200 418 ntBASIC15.98■□□□□ 0.15
COL5A1P20908 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.98■□□□□ 0.15
COL5A1P20908 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.98■□□□□ 0.15
COL5A1P20908 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.98■□□□□ 0.15
COL5A1P20908 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL5A1P20908 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL5A1P20908 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL5A1P20908 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.97■□□□□ 0.15
COL5A1P20908 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.97■□□□□ 0.15
COL5A1P20908 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 AC139713.2-201ENST00000641328 2723 ntBASIC15.97■□□□□ 0.15
COL5A1P20908 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
COL5A1P20908 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
COL5A1P20908 AC098614.1-201ENST00000368528 745 ntBASIC15.97■□□□□ 0.15
COL5A1P20908 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.97■□□□□ 0.15
COL5A1P20908 DGCR5-201ENST00000399539 862 ntBASIC15.97■□□□□ 0.15
COL5A1P20908 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.97■□□□□ 0.15
COL5A1P20908 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.97■□□□□ 0.15
COL5A1P20908 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL5A1P20908 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.97■□□□□ 0.15
COL5A1P20908 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 AC018470.1-201ENST00000624790 3129 ntBASIC15.97■□□□□ 0.15
COL5A1P20908 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL5A1P20908 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL5A1P20908 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
COL5A1P20908 AC141586.5-201ENST00000624546 2050 ntBASIC15.96■□□□□ 0.15
COL5A1P20908 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL5A1P20908 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.96■□□□□ 0.15
COL5A1P20908 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL5A1P20908 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.96■□□□□ 0.15
COL5A1P20908 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
COL5A1P20908 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.96■□□□□ 0.15
COL5A1P20908 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL5A1P20908 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.96■□□□□ 0.15
COL5A1P20908 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
COL5A1P20908 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL5A1P20908 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.96■□□□□ 0.15
COL5A1P20908 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL5A1P20908 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms