Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 RPS2P28-201ENST00000314255 741 ntBASIC17.19■□□□□ 0.34
NFKB1P19838 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.19■□□□□ 0.34
NFKB1P19838 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.19■□□□□ 0.34
NFKB1P19838 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFKB1P19838 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NFKB1P19838 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.19■□□□□ 0.34
NFKB1P19838 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.19■□□□□ 0.34
NFKB1P19838 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 AC006277.1-201ENST00000624348 1610 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 AL031284.1-201ENST00000419297 478 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.18■□□□□ 0.34
NFKB1P19838 IGHV3-65-201ENST00000523210 341 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 AC107918.2-201ENST00000530817 355 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
NFKB1P19838 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.18■□□□□ 0.34
NFKB1P19838 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 GGTLC5P-201ENST00000617623 998 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 AC117500.6-201ENST00000624871 588 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 AC005593.1-201ENST00000624894 515 ntBASIC17.18■□□□□ 0.34
NFKB1P19838 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFKB1P19838 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.18■□□□□ 0.34
NFKB1P19838 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NFKB1P19838 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NFKB1P19838 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.17■□□□□ 0.34
NFKB1P19838 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
NFKB1P19838 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
NFKB1P19838 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NFKB1P19838 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
NFKB1P19838 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.17■□□□□ 0.34
NFKB1P19838 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 AC092910.1-201ENST00000482027 1129 ntBASIC17.17■□□□□ 0.34
NFKB1P19838 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.17■□□□□ 0.34
NFKB1P19838 AC013467.2-201ENST00000605472 835 ntBASIC17.17■□□□□ 0.34
NFKB1P19838 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.17■□□□□ 0.34
NFKB1P19838 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.17■□□□□ 0.34
NFKB1P19838 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NFKB1P19838 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFKB1P19838 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFKB1P19838 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms