Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 AC009336.1-201ENST00000608941 1553 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 AL391005.1-201ENST00000623953 2435 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.78■□□□□ 0.6
CLSTN1O94985 AKR1C7P-201ENST00000305623 895 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.78■□□□□ 0.6
CLSTN1O94985 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 RBM17P3-201ENST00000417687 1192 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 SIGLEC30P-201ENST00000455569 941 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 AD001527.2-201ENST00000622994 785 ntBASIC18.78■□□□□ 0.6
CLSTN1O94985 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLSTN1O94985 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLSTN1O94985 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLSTN1O94985 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.77■□□□□ 0.6
CLSTN1O94985 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.77■□□□□ 0.6
CLSTN1O94985 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 PMPCAP1-201ENST00000508114 1576 ntBASIC18.77■□□□□ 0.6
CLSTN1O94985 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CLSTN1O94985 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLSTN1O94985 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLSTN1O94985 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.77■□□□□ 0.6
CLSTN1O94985 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.77■□□□□ 0.6
CLSTN1O94985 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.77■□□□□ 0.6
CLSTN1O94985 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.77■□□□□ 0.6
CLSTN1O94985 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLSTN1O94985 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.77■□□□□ 0.6
CLSTN1O94985 AC148477.5-201ENST00000625164 1645 ntBASIC18.77■□□□□ 0.6
CLSTN1O94985 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
CLSTN1O94985 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.77■□□□□ 0.59
CLSTN1O94985 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
CLSTN1O94985 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.77■□□□□ 0.59
CLSTN1O94985 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLSTN1O94985 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLSTN1O94985 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.77■□□□□ 0.59
CLSTN1O94985 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.77■□□□□ 0.59
CLSTN1O94985 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 TPM4P1-201ENST00000436100 807 ntBASIC18.76■□□□□ 0.59
CLSTN1O94985 AC073648.2-201ENST00000510116 352 ntBASIC18.76■□□□□ 0.59
CLSTN1O94985 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 AL121894.2-201ENST00000602977 491 ntBASIC18.76■□□□□ 0.59
CLSTN1O94985 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CLSTN1O94985 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLSTN1O94985 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.76■□□□□ 0.59
CLSTN1O94985 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLSTN1O94985 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms