Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 AC092053.1-201ENST00000605787 1936 ntBASIC19.52■□□□□ 0.72
USP17L11C9JVI0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L11C9JVI0 AC008677.1-201ENST00000519230 1561 ntBASIC19.52■□□□□ 0.71
USP17L11C9JVI0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP17L11C9JVI0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
USP17L11C9JVI0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
USP17L11C9JVI0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.52■□□□□ 0.71
USP17L11C9JVI0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
USP17L11C9JVI0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 SLC25A39P2-201ENST00000537614 270 ntBASIC19.51■□□□□ 0.71
USP17L11C9JVI0 AC140878.1-201ENST00000565277 250 ntBASIC19.51■□□□□ 0.71
USP17L11C9JVI0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 AL645608.8-201ENST00000606034 2086 ntBASIC19.51■□□□□ 0.71
USP17L11C9JVI0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L11C9JVI0 FRMD8P1-201ENST00000440433 1524 ntBASIC19.51■□□□□ 0.71
USP17L11C9JVI0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 AC027307.2-201ENST00000591252 911 ntBASIC19.5■□□□□ 0.71
USP17L11C9JVI0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 LINC02012-201ENST00000608206 1725 ntBASIC19.5■□□□□ 0.71
USP17L11C9JVI0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 AC108860.2-201ENST00000562760 2183 ntBASIC19.5■□□□□ 0.71
USP17L11C9JVI0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L11C9JVI0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 MIR346-201ENST00000362234 95 ntBASIC19.49■□□□□ 0.71
USP17L11C9JVI0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 AP000842.3-202ENST00000569238 1080 ntBASIC19.49■□□□□ 0.71
USP17L11C9JVI0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 MPDU1-223ENST00000582151 728 ntBASIC19.49■□□□□ 0.71
USP17L11C9JVI0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.49■□□□□ 0.71
USP17L11C9JVI0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms