Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 BICD1-207ENST00000551848 1962 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 AC016396.2-201ENST00000562575 1417 ntBASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTCBQ9Y3I0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AL080243.2-201ENST00000418783 582 ntBASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AC098859.1-201ENST00000502915 1238 ntBASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 ZNF890P-202ENST00000530367 1156 ntBASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AC132938.2-201ENST00000579188 680 ntBASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AL591163.1-201ENST00000641757 987 ntBASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.11■□□□□ 0.97
RTCBQ9Y3I0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTCBQ9Y3I0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 SLC25A6P5-201ENST00000435663 894 ntBASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 ACA64.2-201ENST00000459014 129 ntBASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 AC011495.1-201ENST00000498085 584 ntBASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 RNA5SP410-201ENST00000516285 106 ntBASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 AC020763.4-201ENST00000623414 4170 ntBASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTCBQ9Y3I0 AC004408.2-201ENST00000623613 2777 ntBASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 SPDYE19P-201ENST00000338590 713 ntBASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 AC079776.1-201ENST00000401540 1152 ntBASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 RPS2P32-201ENST00000439199 892 ntBASIC21.08■□□□□ 0.97
RTCBQ9Y3I0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms