Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp5Q9D7S9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp5Q9D7S9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Gm9727-201ENSMUST00000161387 555 ntBASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms