Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 AL513480.1-201ENST00000451731 511 ntBASIC20.43■□□□□ 0.86
SALL3Q9BXA9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 AL031432.2-201ENST00000566714 459 ntBASIC20.43■□□□□ 0.86
SALL3Q9BXA9 AL928711.1-201ENST00000570165 459 ntBASIC20.43■□□□□ 0.86
SALL3Q9BXA9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 AC120114.3-201ENST00000611923 658 ntBASIC20.43■□□□□ 0.86
SALL3Q9BXA9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.43■□□□□ 0.86
SALL3Q9BXA9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.42■□□□□ 0.86
SALL3Q9BXA9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AL031055.1-201ENST00000606362 631 ntBASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AP001350.2-201ENST00000625104 1094 ntBASIC20.42■□□□□ 0.86
SALL3Q9BXA9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AC092364.2-201ENST00000596710 2692 ntBASIC20.42■□□□□ 0.86
SALL3Q9BXA9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 AL662844.4-201ENST00000606367 2838 ntBASIC20.42■□□□□ 0.86
SALL3Q9BXA9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL3Q9BXA9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 AL671883.3-201ENST00000603274 991 ntBASIC20.41■□□□□ 0.86
SALL3Q9BXA9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL3Q9BXA9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 KRT19P2-202ENST00000557173 1012 ntBASIC20.4■□□□□ 0.86
SALL3Q9BXA9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.4■□□□□ 0.86
SALL3Q9BXA9 AC140113.2-201ENST00000604370 208 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms