Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 AC093458.2-201ENST00000623150 629 ntBASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 AL603756.1-201ENST00000606511 2163 ntBASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 AGGF1P2-201ENST00000426656 2106 ntBASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHRDL1Q9BU40 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC116353.5-201ENST00000638148 1699 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AL353593.2-201ENST00000602529 1483 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 RCN1P2-201ENST00000398357 915 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ATP5G2P1-201ENST00000433580 426 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC104819.1-201ENST00000504587 486 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 STK25P1-201ENST00000585406 838 ntBASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CHRDL1Q9BU40 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 TSPY26P-202ENST00000565928 3884 ntBASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 UBALD1-205ENST00000590891 2641 ntBASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 INTS4P1-201ENST00000438455 1935 ntBASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CHRDL1Q9BU40 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms