Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 FAM58DP-201ENST00000428076 619 ntBASIC19.79■□□□□ 0.76
TRIM47Q96LD4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 GAPDHP21-201ENST00000450301 1010 ntBASIC19.79■□□□□ 0.76
TRIM47Q96LD4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AC069335.1-201ENST00000489972 472 ntBASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AL512356.2-201ENST00000546955 174 ntBASIC19.79■□□□□ 0.76
TRIM47Q96LD4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM47Q96LD4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 AL592309.1-201ENST00000443127 649 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 SPDYE11-202ENST00000450699 704 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 SPDYE9P-201ENST00000570642 692 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 SPDYE10P-202ENST00000612005 668 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 SPDYE8P-202ENST00000612377 668 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 AC141586.5-201ENST00000624546 2050 ntBASIC19.78■□□□□ 0.76
TRIM47Q96LD4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM47Q96LD4 TUBB3P1-201ENST00000405796 1332 ntBASIC19.77■□□□□ 0.76
TRIM47Q96LD4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 AC106820.2-201ENST00000563775 3264 ntBASIC19.77■□□□□ 0.76
TRIM47Q96LD4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 FAM86C2P-203ENST00000528684 1004 ntBASIC19.77■□□□□ 0.76
TRIM47Q96LD4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM47Q96LD4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM47Q96LD4 BX276092.7-203ENST00000637198 1536 ntBASIC19.76■□□□□ 0.75
TRIM47Q96LD4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.76■□□□□ 0.75
TRIM47Q96LD4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AC079140.1-201ENST00000508039 487 ntBASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms