Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AL031432.2-201ENST00000566714 459 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AL928711.1-201ENST00000570165 459 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AC091812.2-201ENST00000619081 385 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 AC092919.2-201ENST00000623631 1645 ntBASIC17.79■□□□□ 0.44
TTC16Q8NEE8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TTC16Q8NEE8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 LTB4R2-202ENST00000528054 3092 ntBASIC17.78■□□□□ 0.44
TTC16Q8NEE8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 AC087163.2-201ENST00000457299 853 ntBASIC17.78■□□□□ 0.44
TTC16Q8NEE8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC16Q8NEE8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AP006288.1-201ENST00000446065 395 ntBASIC17.77■□□□□ 0.44
TTC16Q8NEE8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC16Q8NEE8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC16Q8NEE8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TTC16Q8NEE8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms