Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.67■□□□□ 0.26
SYVN1Q86TM6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYVN1Q86TM6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYVN1Q86TM6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYVN1Q86TM6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AC092910.1-201ENST00000482027 1129 ntBASIC16.66■□□□□ 0.26
SYVN1Q86TM6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 MTDHP4-201ENST00000600287 670 ntBASIC16.66■□□□□ 0.26
SYVN1Q86TM6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AC027601.4-201ENST00000611259 610 ntBASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SYVN1Q86TM6 AC018695.7-201ENST00000624587 2492 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AC104109.2-201ENST00000602919 1418 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 MIR1233-2-201ENST00000408138 82 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 MIR1233-1-201ENST00000408722 82 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 BX842568.4-201ENST00000421222 227 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AC098831.1-202ENST00000438821 336 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 AC107918.4-202ENST00000641623 219 ntBASIC16.65■□□□□ 0.26
SYVN1Q86TM6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYVN1Q86TM6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SYVN1Q86TM6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SYVN1Q86TM6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 LAGE3P1-201ENST00000425356 484 ntBASIC16.64■□□□□ 0.25
SYVN1Q86TM6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
SYVN1Q86TM6 AL591424.1-201ENST00000442569 1213 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms