Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 RN7SL837P-201ENST00000463010 287 ntBASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 RN7SL618P-201ENST00000477850 296 ntBASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 NAA38-207ENST00000576861 556 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 RAB35-202ENST00000534951 939 ntTSL 2 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 IMPDH1P4-201ENST00000445028 1534 ntBASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDC42BPAQ5VT25 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AP006294.1-201ENST00000415407 339 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 PTPA-220ENST00000436883 532 ntTSL 4 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 GPR53P-205ENST00000457298 1084 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 MAX-210ENST00000555419 765 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC008494.3-201ENST00000606615 944 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 SERF2-217ENST00000630046 862 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 GGT4P-201ENST00000623672 1708 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC114501.2-201ENST00000439631 535 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC098859.1-201ENST00000502915 1238 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC044860.1-202ENST00000559481 777 ntBASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC25.17■■□□□ 1.62
CDC42BPAQ5VT25 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 AC119751.2-201ENST00000504529 210 ntBASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 AC055876.2-201ENST00000531834 546 ntBASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 CHCHD2P3-201ENST00000603038 451 ntBASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CDC42BPAQ5VT25 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 5S_rRNA.22-201ENST00000614916 106 ntBASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42BPAQ5VT25 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms