Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ACLYP53396 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
ACLYP53396 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ACLYP53396 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.47■□□□□ 0.55
ACLYP53396 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.47■□□□□ 0.55
ACLYP53396 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ACLYP53396 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.47■□□□□ 0.55
ACLYP53396 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.47■□□□□ 0.55
ACLYP53396 IGHV3-71-201ENST00000523324 359 ntBASIC18.47■□□□□ 0.55
ACLYP53396 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.47■□□□□ 0.55
ACLYP53396 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.47■□□□□ 0.55
ACLYP53396 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.47■□□□□ 0.55
ACLYP53396 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ACLYP53396 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACLYP53396 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ACLYP53396 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ACLYP53396 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ACLYP53396 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 AC073439.1-201ENST00000624121 1774 ntBASIC18.46■□□□□ 0.55
ACLYP53396 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
ACLYP53396 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.46■□□□□ 0.55
ACLYP53396 GIMAP3P-201ENST00000495150 836 ntBASIC18.46■□□□□ 0.55
ACLYP53396 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
ACLYP53396 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 BANF1P1-201ENST00000553684 263 ntBASIC18.46■□□□□ 0.55
ACLYP53396 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.46■□□□□ 0.55
ACLYP53396 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.46■□□□□ 0.55
ACLYP53396 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.46■□□□□ 0.55
ACLYP53396 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ACLYP53396 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACLYP53396 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ACLYP53396 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.46■□□□□ 0.54
ACLYP53396 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ACLYP53396 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 DGCR5-201ENST00000399539 862 ntBASIC18.45■□□□□ 0.54
ACLYP53396 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 GNAQP1-201ENST00000444815 1067 ntBASIC18.45■□□□□ 0.54
ACLYP53396 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.45■□□□□ 0.54
ACLYP53396 AC135586.1-201ENST00000539323 574 ntBASIC18.45■□□□□ 0.54
ACLYP53396 AC105021.1-202ENST00000570572 669 ntBASIC18.45■□□□□ 0.54
ACLYP53396 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACLYP53396 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.45■□□□□ 0.54
ACLYP53396 AC087289.5-201ENST00000586076 3175 ntBASIC18.45■□□□□ 0.54
ACLYP53396 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACLYP53396 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
ACLYP53396 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACLYP53396 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACLYP53396 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.44■□□□□ 0.54
ACLYP53396 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACLYP53396 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.44■□□□□ 0.54
ACLYP53396 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ACLYP53396 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ACLYP53396 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms