Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
KRT20P35900 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
KRT20P35900 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT20P35900 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT20P35900 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT20P35900 AL691432.3-201ENST00000621860 400 ntBASIC16.15■□□□□ 0.18
KRT20P35900 AD001527.2-201ENST00000622994 785 ntBASIC16.15■□□□□ 0.18
KRT20P35900 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 AC068587.6-202ENST00000641839 5619 ntBASIC16.15■□□□□ 0.18
KRT20P35900 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KRT20P35900 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT20P35900 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT20P35900 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
KRT20P35900 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
KRT20P35900 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT20P35900 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 RBM17P3-201ENST00000417687 1192 ntBASIC16.14■□□□□ 0.17
KRT20P35900 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
KRT20P35900 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT20P35900 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 STK25P1-201ENST00000585406 838 ntBASIC16.14■□□□□ 0.17
KRT20P35900 IFNL4P1-201ENST00000607083 540 ntBASIC16.14■□□□□ 0.17
KRT20P35900 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
KRT20P35900 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT20P35900 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT20P35900 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
KRT20P35900 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT20P35900 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT20P35900 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT20P35900 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms