Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.27■□□□□ 0.83
CHGBP05060 AC012569.1-201ENST00000591191 1524 ntBASIC20.27■□□□□ 0.83
CHGBP05060 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
CHGBP05060 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHGBP05060 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHGBP05060 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHGBP05060 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 AL021920.2-201ENST00000624828 1351 ntBASIC20.26■□□□□ 0.83
CHGBP05060 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.26■□□□□ 0.83
CHGBP05060 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.26■□□□□ 0.83
CHGBP05060 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CHGBP05060 KRT18P13-201ENST00000400056 1290 ntBASIC20.26■□□□□ 0.83
CHGBP05060 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.26■□□□□ 0.83
CHGBP05060 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CHGBP05060 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.26■□□□□ 0.83
CHGBP05060 AC005412.3-201ENST00000580309 715 ntBASIC20.26■□□□□ 0.83
CHGBP05060 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 AC007064.4-201ENST00000637740 555 ntBASIC20.26■□□□□ 0.83
CHGBP05060 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CHGBP05060 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.26■□□□□ 0.83
CHGBP05060 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHGBP05060 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHGBP05060 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CHGBP05060 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.26■□□□□ 0.83
CHGBP05060 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHGBP05060 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.25■□□□□ 0.83
CHGBP05060 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.25■□□□□ 0.83
CHGBP05060 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.25■□□□□ 0.83
CHGBP05060 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.25■□□□□ 0.83
CHGBP05060 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.25■□□□□ 0.83
CHGBP05060 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 AC099522.2-201ENST00000607001 744 ntBASIC20.25■□□□□ 0.83
CHGBP05060 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.25■□□□□ 0.83
CHGBP05060 AC139530.3-201ENST00000620344 690 ntBASIC20.25■□□□□ 0.83
CHGBP05060 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CHGBP05060 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHGBP05060 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.25■□□□□ 0.83
CHGBP05060 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHGBP05060 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.24■□□□□ 0.83
CHGBP05060 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CHGBP05060 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.24■□□□□ 0.83
CHGBP05060 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 FAM58CP-201ENST00000435741 640 ntBASIC20.24■□□□□ 0.83
CHGBP05060 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.24■□□□□ 0.83
CHGBP05060 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
CHGBP05060 AC068137.2-201ENST00000605408 478 ntBASIC20.24■□□□□ 0.83
CHGBP05060 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHGBP05060 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHGBP05060 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHGBP05060 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHGBP05060 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms