Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.26■□□□□ 0.19
SEMA3DO95025 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3DO95025 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3DO95025 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3DO95025 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3DO95025 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SEMA3DO95025 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3DO95025 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3DO95025 DUSP5P1-201ENST00000441325 1139 ntBASIC16.25■□□□□ 0.19
SEMA3DO95025 PAWRP1-201ENST00000451083 565 ntBASIC16.25■□□□□ 0.19
SEMA3DO95025 UNC93B7-201ENST00000509439 705 ntBASIC16.25■□□□□ 0.19
SEMA3DO95025 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.25■□□□□ 0.19
SEMA3DO95025 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SEMA3DO95025 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3DO95025 AF228730.7-201ENST00000641842 219 ntBASIC16.25■□□□□ 0.19
SEMA3DO95025 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3DO95025 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3DO95025 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3DO95025 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3DO95025 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3DO95025 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.24■□□□□ 0.19
SEMA3DO95025 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.24■□□□□ 0.19
SEMA3DO95025 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.24■□□□□ 0.19
SEMA3DO95025 AC073648.2-201ENST00000510116 352 ntBASIC16.24■□□□□ 0.19
SEMA3DO95025 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.24■□□□□ 0.19
SEMA3DO95025 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SEMA3DO95025 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.24■□□□□ 0.19
SEMA3DO95025 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SEMA3DO95025 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3DO95025 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3DO95025 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 KRT8P49-201ENST00000604166 1432 ntBASIC16.23■□□□□ 0.19
SEMA3DO95025 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 ELK2BP-201ENST00000415014 1224 ntBASIC16.23■□□□□ 0.19
SEMA3DO95025 AGGF1P2-201ENST00000426656 2106 ntBASIC16.23■□□□□ 0.19
SEMA3DO95025 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.23■□□□□ 0.19
SEMA3DO95025 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SEMA3DO95025 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.23■□□□□ 0.19
SEMA3DO95025 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.23■□□□□ 0.19
SEMA3DO95025 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.23■□□□□ 0.19
SEMA3DO95025 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.23■□□□□ 0.19
SEMA3DO95025 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SEMA3DO95025 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SEMA3DO95025 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms