Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
KLHL41O60662 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.87■□□□□ 0.29
KLHL41O60662 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.86■□□□□ 0.29
KLHL41O60662 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
KLHL41O60662 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.86■□□□□ 0.29
KLHL41O60662 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
KLHL41O60662 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
KLHL41O60662 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.86■□□□□ 0.29
KLHL41O60662 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KLHL41O60662 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
KLHL41O60662 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.85■□□□□ 0.29
KLHL41O60662 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.85■□□□□ 0.29
KLHL41O60662 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 REXO1L6P-202ENST00000619970 1078 ntBASIC16.85■□□□□ 0.29
KLHL41O60662 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.85■□□□□ 0.29
KLHL41O60662 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KLHL41O60662 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.85■□□□□ 0.29
KLHL41O60662 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.84■□□□□ 0.29
KLHL41O60662 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
KLHL41O60662 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KLHL41O60662 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms