Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16■□□□□ 0.15
PLOD3O60568 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PLOD3O60568 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PLOD3O60568 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PLOD3O60568 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.99■□□□□ 0.15
PLOD3O60568 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.99■□□□□ 0.15
PLOD3O60568 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.99■□□□□ 0.15
PLOD3O60568 RN7SL510P-201ENST00000581311 263 ntBASIC15.99■□□□□ 0.15
PLOD3O60568 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.99■□□□□ 0.15
PLOD3O60568 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.99■□□□□ 0.15
PLOD3O60568 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PLOD3O60568 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.99■□□□□ 0.15
PLOD3O60568 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PLOD3O60568 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.98■□□□□ 0.15
PLOD3O60568 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 AC004870.1-201ENST00000315132 882 ntBASIC15.98■□□□□ 0.15
PLOD3O60568 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PLOD3O60568 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.98■□□□□ 0.15
PLOD3O60568 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.98■□□□□ 0.15
PLOD3O60568 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
PLOD3O60568 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 AC073648.2-201ENST00000510116 352 ntBASIC15.98■□□□□ 0.15
PLOD3O60568 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.98■□□□□ 0.15
PLOD3O60568 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.98■□□□□ 0.15
PLOD3O60568 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.98■□□□□ 0.15
PLOD3O60568 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.98■□□□□ 0.15
PLOD3O60568 AC006557.2-201ENST00000592985 1240 ntBASIC15.98■□□□□ 0.15
PLOD3O60568 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.98■□□□□ 0.15
PLOD3O60568 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
PLOD3O60568 AL691432.3-201ENST00000621860 400 ntBASIC15.98■□□□□ 0.15
PLOD3O60568 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PLOD3O60568 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
PLOD3O60568 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PLOD3O60568 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PLOD3O60568 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms