Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 UNC93B2-201ENST00000285383 730 ntBASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 AC068472.1-201ENST00000474589 881 ntBASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ITM2C-210ENST00000620962 501 ntBASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 AL049637.2-201ENST00000641778 930 ntBASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLPTM1LQ96KA5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 GPR89P-201ENST00000407924 1495 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AP002490.2-201ENST00000524791 560 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 FITM1-202ENST00000559294 800 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 NEK4P2-201ENST00000580004 1012 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AC079602.3-201ENST00000623931 403 ntBASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.3■□□□□ 0.2
CLPTM1LQ96KA5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLPTM1LQ96KA5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms