Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 AF186996.4-201ENST00000467186 377 ntBASIC16.58■□□□□ 0.24
ATL1Q8WXF7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 RNPS1P1-201ENST00000507437 918 ntBASIC16.58■□□□□ 0.24
ATL1Q8WXF7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATL1Q8WXF7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 FAM197Y8-203ENST00000450145 560 ntBASIC16.57■□□□□ 0.24
ATL1Q8WXF7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 AL805961.1-202ENST00000641562 540 ntBASIC16.57■□□□□ 0.24
ATL1Q8WXF7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATL1Q8WXF7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 KRT18P67-201ENST00000432816 1264 ntBASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 RN7SL510P-201ENST00000581311 263 ntBASIC16.56■□□□□ 0.24
ATL1Q8WXF7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.56■□□□□ 0.24
ATL1Q8WXF7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms