Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AC005229.1-201ENST00000392885 409 ntBASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 KRT18P55-202ENST00000578578 1546 ntBASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AC061975.2-201ENST00000581722 295 ntBASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AC103810.3-201ENST00000583567 96 ntBASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AL033527.5-201ENST00000641382 801 ntBASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.21□□□□□ -0.61
ALMS1Q8TCU4 AP000974.1-201ENST00000623909 2387 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 IGHJ2P-201ENST00000454480 60 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 FAM86HP-204ENST00000513466 959 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 AC233724.13-201ENST00000598383 410 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 AL391069.4-201ENST00000609583 481 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 AC104581.1-202ENST00000635932 2618 ntBASIC11.21□□□□□ -0.62
ALMS1Q8TCU4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 BCRP2-202ENST00000447763 634 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FO681548.1-201ENST00000455617 1132 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 BCRP6-201ENST00000510112 632 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 BCRP7-201ENST00000511549 544 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 RNA5SP412-201ENST00000516234 123 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 RN7SL828P-201ENST00000607615 303 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FLJ13224-201ENST00000313737 1514 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FXNP2-201ENST00000411625 547 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 SERBP1P3-201ENST00000459980 809 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 AC091271.1-201ENST00000611877 1162 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 EGFEM1P-202ENST00000431685 1563 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 TNXA-203ENST00000507684 2038 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 KRT8P12-202ENST00000472924 1397 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 LETM1P2-201ENST00000597330 2178 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 AC009542.2-202ENST00000619004 1067 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ALMS1Q8TCU4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms