Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.87■□□□□ 0.13
NUP43Q8NFH3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NUP43Q8NFH3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 AL118508.1-201ENST00000613502 2345 ntBASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 AC124067.4-201ENST00000519691 2379 ntBASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 PI4KAP1-204ENST00000612579 1703 ntBASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ELK2BP-201ENST00000415014 1224 ntBASIC15.86■□□□□ 0.13
NUP43Q8NFH3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 AL121912.1-201ENST00000603683 238 ntBASIC15.86■□□□□ 0.13
NUP43Q8NFH3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NUP43Q8NFH3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 RNPS1P1-201ENST00000507437 918 ntBASIC15.85■□□□□ 0.13
NUP43Q8NFH3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 AC092171.3-201ENST00000610122 2651 ntBASIC15.85■□□□□ 0.13
NUP43Q8NFH3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NUP43Q8NFH3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms