Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 FAM185BP-201ENST00000443595 716 ntBASIC15.74■□□□□ 0.11
BEST3Q8N1M1 AP006288.1-201ENST00000446065 395 ntBASIC15.74■□□□□ 0.11
BEST3Q8N1M1 AL513480.1-201ENST00000451731 511 ntBASIC15.74■□□□□ 0.11
BEST3Q8N1M1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 ACTL9-202ENST00000612068 1252 ntBASIC15.74■□□□□ 0.11
BEST3Q8N1M1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST3Q8N1M1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 FAM58CP-201ENST00000435741 640 ntBASIC15.73■□□□□ 0.11
BEST3Q8N1M1 MKNK2P1-201ENST00000437526 628 ntBASIC15.73■□□□□ 0.11
BEST3Q8N1M1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST3Q8N1M1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.73■□□□□ 0.11
BEST3Q8N1M1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.72■□□□□ 0.11
BEST3Q8N1M1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 CEND1P1-201ENST00000451006 455 ntBASIC15.72■□□□□ 0.11
BEST3Q8N1M1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST3Q8N1M1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms