Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC069335.1-201ENST00000489972 472 ntBASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AL512356.2-201ENST00000546955 174 ntBASIC17.99■□□□□ 0.47
RNF135Q8IUD6 CR383656.12-201ENST00000549567 513 ntBASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.98■□□□□ 0.47
RNF135Q8IUD6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC022494.1-201ENST00000466044 728 ntBASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC116407.2-201ENST00000613639 860 ntBASIC17.98■□□□□ 0.47
RNF135Q8IUD6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC097637.2-201ENST00000624096 1997 ntBASIC17.98■□□□□ 0.47
RNF135Q8IUD6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF135Q8IUD6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AC107890.1-201ENST00000422478 521 ntBASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AL671277.1-201ENST00000429656 993 ntBASIC17.97■□□□□ 0.47
RNF135Q8IUD6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 KRT8P48-201ENST00000515599 1220 ntBASIC17.97■□□□□ 0.47
RNF135Q8IUD6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 AL358472.5-202ENST00000641448 1267 ntBASIC17.97■□□□□ 0.47
RNF135Q8IUD6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms