Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19■□□□□ 0.63
HOXC6P09630 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19■□□□□ 0.63
HOXC6P09630 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 SLC25A1P3-201ENST00000395415 828 ntBASIC19■□□□□ 0.63
HOXC6P09630 COX5BP8-201ENST00000416911 349 ntBASIC19■□□□□ 0.63
HOXC6P09630 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19■□□□□ 0.63
HOXC6P09630 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HOXC6P09630 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19■□□□□ 0.63
HOXC6P09630 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19■□□□□ 0.63
HOXC6P09630 MIR4492-201ENST00000581627 80 ntBASIC19■□□□□ 0.63
HOXC6P09630 AL138828.2-201ENST00000615812 383 ntBASIC19■□□□□ 0.63
HOXC6P09630 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXC6P09630 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXC6P09630 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
HOXC6P09630 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19■□□□□ 0.63
HOXC6P09630 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXC6P09630 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 CYP2A7P1-201ENST00000595391 815 ntBASIC18.99■□□□□ 0.63
HOXC6P09630 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HOXC6P09630 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXC6P09630 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 AC016396.2-201ENST00000562575 1417 ntBASIC18.99■□□□□ 0.63
HOXC6P09630 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXC6P09630 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HOXC6P09630 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.98■□□□□ 0.63
HOXC6P09630 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC6P09630 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HOXC6P09630 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXC6P09630 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 OR8S1-201ENST00000310194 1080 ntBASIC18.98■□□□□ 0.63
HOXC6P09630 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 AC009477.1-201ENST00000452936 217 ntBASIC18.98■□□□□ 0.63
HOXC6P09630 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 RN7SL692P-201ENST00000464677 288 ntBASIC18.98■□□□□ 0.63
HOXC6P09630 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC6P09630 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC6P09630 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC6P09630 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
HOXC6P09630 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXC6P09630 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HOXC6P09630 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 KRT8P49-201ENST00000604166 1432 ntBASIC18.98■□□□□ 0.63
HOXC6P09630 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXC6P09630 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXC6P09630 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXC6P09630 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXC6P09630 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXC6P09630 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms