Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 UNC93B7-201ENST00000509439 705 ntBASIC17.33■□□□□ 0.36
MT-ND3P03897 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.33■□□□□ 0.36
MT-ND3P03897 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND3P03897 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.33■□□□□ 0.36
MT-ND3P03897 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-ND3P03897 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.33■□□□□ 0.36
MT-ND3P03897 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.33■□□□□ 0.36
MT-ND3P03897 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
MT-ND3P03897 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
MT-ND3P03897 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MT-ND3P03897 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
MT-ND3P03897 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MT-ND3P03897 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 EGFEM1P-202ENST00000431685 1563 ntBASIC17.32■□□□□ 0.36
MT-ND3P03897 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MT-ND3P03897 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND3P03897 RN7SL606P-201ENST00000472779 293 ntBASIC17.32■□□□□ 0.36
MT-ND3P03897 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.32■□□□□ 0.36
MT-ND3P03897 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 AC011840.4-201ENST00000578471 627 ntBASIC17.32■□□□□ 0.36
MT-ND3P03897 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MT-ND3P03897 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.32■□□□□ 0.36
MT-ND3P03897 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND3P03897 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MT-ND3P03897 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.32■□□□□ 0.36
MT-ND3P03897 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
MT-ND3P03897 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MT-ND3P03897 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-ND3P03897 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 KRT8P10-201ENST00000450021 1447 ntBASIC17.31■□□□□ 0.36
MT-ND3P03897 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 AL162727.3-201ENST00000635661 2787 ntBASIC17.31■□□□□ 0.36
MT-ND3P03897 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-ND3P03897 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
MT-ND3P03897 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.31■□□□□ 0.36
MT-ND3P03897 AC099336.1-202ENST00000602961 463 ntBASIC17.31■□□□□ 0.36
MT-ND3P03897 AL732292.2-201ENST00000609649 430 ntBASIC17.31■□□□□ 0.36
MT-ND3P03897 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.31■□□□□ 0.36
MT-ND3P03897 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-ND3P03897 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MT-ND3P03897 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MT-ND3P03897 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MT-ND3P03897 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.31■□□□□ 0.36
MT-ND3P03897 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms