Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF40O75150 LINC01126-201ENST00000623515 1646 ntBASIC18.37■□□□□ 0.53
RNF40O75150 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF40O75150 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF40O75150 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF40O75150 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF40O75150 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF40O75150 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF40O75150 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 ZNF259P1-201ENST00000407656 1365 ntBASIC18.36■□□□□ 0.53
RNF40O75150 MIR1233-2-201ENST00000408138 82 ntBASIC18.36■□□□□ 0.53
RNF40O75150 MIR1233-1-201ENST00000408722 82 ntBASIC18.36■□□□□ 0.53
RNF40O75150 STK33P1-201ENST00000423835 1218 ntBASIC18.36■□□□□ 0.53
RNF40O75150 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF40O75150 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF40O75150 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF40O75150 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF40O75150 HLA-J-201ENST00000462773 1622 ntBASIC18.36■□□□□ 0.53
RNF40O75150 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF40O75150 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.36■□□□□ 0.53
RNF40O75150 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF40O75150 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF40O75150 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RNF40O75150 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF40O75150 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 AC007950.2-201ENST00000615045 2347 ntBASIC18.35■□□□□ 0.53
RNF40O75150 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 RPS2P28-201ENST00000314255 741 ntBASIC18.35■□□□□ 0.53
RNF40O75150 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF40O75150 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF40O75150 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF40O75150 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF40O75150 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF40O75150 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF40O75150 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms