Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PMS2P4-201ENST00000412466 1052 ntBASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC023141.5-201ENST00000458585 616 ntBASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL135744.1-201ENST00000565098 629 ntBASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC027796.2-201ENST00000575326 344 ntBASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AL023806.1-201ENST00000603994 1649 ntBASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC092474.2-201ENST00000424288 719 ntBASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC005237.2-201ENST00000434368 219 ntBASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KRT8P48-201ENST00000515599 1220 ntBASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms