Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.04■□□□□ 0.48
RCCD1A6NED2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RCCD1A6NED2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 AC006277.1-201ENST00000624348 1610 ntBASIC18.03■□□□□ 0.48
RCCD1A6NED2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RCCD1A6NED2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RCCD1A6NED2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 KRT18P1-202ENST00000452408 1331 ntBASIC18.02■□□□□ 0.48
RCCD1A6NED2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 FAM86EP-206ENST00000510506 987 ntBASIC18.02■□□□□ 0.48
RCCD1A6NED2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 KRT8P49-201ENST00000604166 1432 ntBASIC18.02■□□□□ 0.48
RCCD1A6NED2 AL671710.1-201ENST00000610245 2349 ntBASIC18.02■□□□□ 0.48
RCCD1A6NED2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RCCD1A6NED2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RCCD1A6NED2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCCD1A6NED2 AL596087.1-201ENST00000400979 1969 ntBASIC18.02■□□□□ 0.47
RCCD1A6NED2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCCD1A6NED2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.02■□□□□ 0.47
RCCD1A6NED2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCCD1A6NED2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCCD1A6NED2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.02■□□□□ 0.47
RCCD1A6NED2 AC010491.1-201ENST00000563101 2797 ntBASIC18.02■□□□□ 0.47
RCCD1A6NED2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RCCD1A6NED2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 SIGLEC16-201ENST00000599858 1437 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 DRAXINP1-201ENST00000437611 948 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 KRT17P6-201ENST00000453795 1220 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.01■□□□□ 0.47
RCCD1A6NED2 AC013467.2-201ENST00000605472 835 ntBASIC18.01■□□□□ 0.47
RCCD1A6NED2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms