Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.122e-6■□□□□ 10.4
HNRNPUQ00839 HBG2-202ENST00000380252 694 ntTSL 3 BASIC13.41□□□□□ -0.262e-6■□□□□ 10.4
HNRNPUQ00839 AC069277.1-203ENST00000414603 517 ntTSL 312.95□□□□□ -0.342e-6■□□□□ 10.4
HNRNPUQ00839 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.472e-6■□□□□ 10.4
HNRNPUQ00839 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC10.26□□□□□ -0.772e-6■□□□□ 10.4
HNRNPUQ00839 AC087380.1-201ENST00000420465 1001 ntTSL 39.47□□□□□ -0.892e-6■□□□□ 10.4
HNRNPUQ00839 AC069277.1-204ENST00000342990 246 ntTSL 38.75□□□□□ -1.012e-6■□□□□ 10.4
HNRNPUQ00839 AC087380.1-203ENST00000420726 752 ntTSL 58.1□□□□□ -1.112e-6■□□□□ 10.4
HNRNPUQ00839 HBE1-203ENST00000396895 578 ntTSL 57.23□□□□□ -1.252e-6■□□□□ 10.4
HNRNPUQ00839 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.257e-8■□□□□ 10.4
HNRNPUQ00839 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.712e-6■□□□□ 10.4
HNRNPUQ00839 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.832e-6■□□□□ 10.4
HNRNPUQ00839 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.882e-6■□□□□ 10.4
HNRNPUQ00839 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.342e-6■□□□□ 10.4
HNRNPUQ00839 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.91■□□□□ 0.621e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC40■■■■□ 3.993e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC33.49■■■□□ 2.953e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.93e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-207ENST00000435198 1056 ntTSL 332.38■■■□□ 2.773e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-208ENST00000450390 2455 ntTSL 530.32■■■□□ 2.443e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-210ENST00000464036 1256 ntTSL 329.96■■■□□ 2.393e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC29.23■■■□□ 2.273e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.213e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.73■■■□□ 2.193e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.193e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-214ENST00000473215 1028 ntTSL 327.79■■■□□ 2.043e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.823e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.633e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-206ENST00000422076 643 ntTSL 525.21■■□□□ 1.633e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-219ENST00000503294 814 ntTSL 425.16■■□□□ 1.623e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-220ENST00000509720 472 ntTSL 324.71■■□□□ 1.553e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.43e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.73■■□□□ 1.393e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-211ENST00000466752 886 ntTSL 323.41■■□□□ 1.343e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-217ENST00000491779 611 ntTSL 223.41■■□□□ 1.343e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.92■■□□□ 1.263e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.78■■□□□ 1.243e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.953e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.93e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-218ENST00000502382 530 ntTSL 420.32■□□□□ 0.843e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-215ENST00000477894 767 ntTSL 520.07■□□□□ 0.83e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.793e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.783e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.763e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.673e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.493e-6■□□□□ 10.4
HNRNPUQ00839 POLE-208ENST00000535934 1561 ntTSL 517.61■□□□□ 0.413e-6■□□□□ 10.4
HNRNPUQ00839 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.193e-6■□□□□ 10.4
HNRNPUQ00839 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.183e-6■□□□□ 10.4
HNRNPUQ00839 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC15.78■□□□□ 0.123e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-210ENST00000525990 701 ntTSL 215.07■□□□□ 03e-6■□□□□ 10.4
HNRNPUQ00839 POLE-210ENST00000537064 8011 ntTSL 1 (best)14.58□□□□□ -0.083e-6■□□□□ 10.4
HNRNPUQ00839 SSBP3-215ENST00000533946 431 ntTSL 312.17□□□□□ -0.463e-6■□□□□ 10.4
HNRNPUQ00839 STEAP1B-204ENST00000439708 797 ntTSL 39.34□□□□□ -0.913e-6■□□□□ 10.4
HNRNPUQ00839 UBE2J2-213ENST00000471154 336 ntTSL 54.74□□□□□ -1.653e-6■□□□□ 10.4
HNRNPUQ00839 HLF-207ENST00000573422 493 ntTSL 414.68□□□□□ -0.061e-6■□□□□ 10.3
HNRNPUQ00839 HLF-206ENST00000573020 414 ntTSL 411.44□□□□□ -0.581e-6■□□□□ 10.3
HNRNPUQ00839 HLF-211ENST00000575868 558 ntTSL 46.67□□□□□ -1.341e-6■□□□□ 10.3
HNRNPUQ00839 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)11.43□□□□□ -0.582e-6■□□□□ 10.3
HNRNPUQ00839 CCDC26-202ENST00000520048 904 ntTSL 310.93□□□□□ -0.662e-6■□□□□ 10.3
HNRNPUQ00839 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.01□□□□□ -1.292e-6■□□□□ 10.3
HNRNPUQ00839 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC27.53■■■□□ 25e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-208ENST00000520872 560 ntTSL 323.73■■□□□ 1.395e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-203ENST00000525083 1228 ntTSL 222.37■■□□□ 1.175e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-207ENST00000527004 1760 ntTSL 521.65■■□□□ 1.065e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.015e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC21.32■■□□□ 15e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.945e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-217ENST00000534011 1955 ntTSL 219.26■□□□□ 0.675e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-218ENST00000534315 2210 ntTSL 1 (best)18.78■□□□□ 0.65e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-204ENST00000518767 1146 ntTSL 1 (best)18.52■□□□□ 0.565e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-204ENST00000525770 1427 ntTSL 218.25■□□□□ 0.515e-6■□□□□ 10.2
HNRNPUQ00839 PFKL-208ENST00000491298 819 ntTSL 517.69■□□□□ 0.425e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC13.64□□□□□ -0.235e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC13.63□□□□□ -0.235e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-228ENST00000524191 808 ntTSL 313.51□□□□□ -0.255e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC12.99□□□□□ -0.335e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-203ENST00000518502 687 ntTSL 312.23□□□□□ -0.455e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.23□□□□□ -0.455e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-216ENST00000533839 559 ntTSL 412.04□□□□□ -0.485e-6■□□□□ 10.2
HNRNPUQ00839 FOXRED1-210ENST00000530642 3045 ntTSL 211.58□□□□□ -0.565e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC10.68□□□□□ -0.75e-6■□□□□ 10.2
HNRNPUQ00839 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.035e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-216ENST00000521736 550 ntTSL 58.59□□□□□ -1.035e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.88□□□□□ -1.155e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-205ENST00000518981 1746 ntTSL 27.47□□□□□ -1.215e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-222ENST00000522962 1041 ntTSL 37.41□□□□□ -1.225e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-206ENST00000519818 590 ntTSL 47.38□□□□□ -1.235e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-213ENST00000521447 727 ntTSL 57.03□□□□□ -1.285e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-227ENST00000524113 658 ntTSL 27.01□□□□□ -1.295e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-218ENST00000522061 564 ntTSL 46.69□□□□□ -1.345e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-217ENST00000521845 546 ntTSL 56.08□□□□□ -1.445e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-223ENST00000523160 227 ntTSL 35.48□□□□□ -1.535e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.19□□□□□ -1.585e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-209ENST00000520945 472 ntTSL 45.18□□□□□ -1.585e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-211ENST00000521293 552 ntTSL 45.02□□□□□ -1.615e-6■□□□□ 10.2
HNRNPUQ00839 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.88□□□□□ -1.795e-6■□□□□ 10.2
HNRNPUQ00839 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.872e-6■□□□□ 10.2
HNRNPUQ00839 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.87■□□□□ 0.292e-6■□□□□ 10.2
HNRNPUQ00839 HLF-204ENST00000572002 1251 ntTSL 316.1■□□□□ 0.172e-6■□□□□ 10.2
Retrieved 100 of 2,288 protein–RNA pairs in 32.7 ms