Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cks1bP61025 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cks1bP61025 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cks1bP61025 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1bP61025 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1bP61025 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cks1bP61025 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cks1bP61025 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1bP61025 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1bP61025 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cks1bP61025 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.34■□□□□ 0.05
Cks1bP61025 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cks1bP61025 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cks1bP61025 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cks1bP61025 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1bP61025 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.33■□□□□ 0.04
Cks1bP61025 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1bP61025 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cks1bP61025 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cks1bP61025 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cks1bP61025 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cks1bP61025 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.32■□□□□ 0.04
Cks1bP61025 Gm45855-201ENSMUST00000212546 880 ntBASIC15.32■□□□□ 0.04
Cks1bP61025 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cks1bP61025 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cks1bP61025 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cks1bP61025 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1bP61025 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1bP61025 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1bP61025 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1bP61025 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cks1bP61025 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cks1bP61025 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.3■□□□□ 0.04
Cks1bP61025 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cks1bP61025 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cks1bP61025 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cks1bP61025 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1bP61025 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.28■□□□□ 0.04
Cks1bP61025 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1bP61025 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1bP61025 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cks1bP61025 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cks1bP61025 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1bP61025 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cks1bP61025 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1bP61025 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1bP61025 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cks1bP61025 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1bP61025 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cks1bP61025 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cks1bP61025 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.26■□□□□ 0.03
Cks1bP61025 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cks1bP61025 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.25■□□□□ 0.03
Cks1bP61025 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Cks1bP61025 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.25■□□□□ 0.03
Cks1bP61025 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1bP61025 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cks1bP61025 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.25■□□□□ 0.03
Cks1bP61025 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cks1bP61025 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cks1bP61025 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cks1bP61025 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cks1bP61025 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cks1bP61025 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cks1bP61025 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cks1bP61025 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.23■□□□□ 0.03
Cks1bP61025 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cks1bP61025 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms