Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Mmp9P41245 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp9P41245 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp9P41245 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp9P41245 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp9P41245 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.09■□□□□ 0.49
Mmp9P41245 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.09■□□□□ 0.49
Mmp9P41245 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.09■□□□□ 0.49
Mmp9P41245 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
Mmp9P41245 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp9P41245 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Mmp9P41245 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Mmp9P41245 Gm7432-201ENSMUST00000210343 879 ntBASIC18.08■□□□□ 0.48
Mmp9P41245 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp9P41245 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp9P41245 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.08■□□□□ 0.48
Mmp9P41245 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp9P41245 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Mmp9P41245 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Mmp9P41245 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp9P41245 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.07■□□□□ 0.48
Mmp9P41245 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp9P41245 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp9P41245 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp9P41245 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp9P41245 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.06■□□□□ 0.48
Mmp9P41245 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mmp9P41245 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp9P41245 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp9P41245 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp9P41245 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.05■□□□□ 0.48
Mmp9P41245 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mmp9P41245 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Mmp9P41245 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mmp9P41245 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.04■□□□□ 0.48
Mmp9P41245 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Mmp9P41245 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp9P41245 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp9P41245 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.04■□□□□ 0.48
Mmp9P41245 Nkain2-201ENSMUST00000092602 558 ntBASIC18.04■□□□□ 0.48
Mmp9P41245 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp9P41245 Iqck-206ENSMUST00000208658 2891 ntBASIC18.04■□□□□ 0.48
Mmp9P41245 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp9P41245 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp9P41245 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.03■□□□□ 0.48
Mmp9P41245 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp9P41245 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.03■□□□□ 0.48
Mmp9P41245 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.03■□□□□ 0.48
Mmp9P41245 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.03■□□□□ 0.48
Mmp9P41245 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp9P41245 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Mmp9P41245 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.03■□□□□ 0.48
Mmp9P41245 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Mmp9P41245 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp9P41245 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mmp9P41245 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Mmp9P41245 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp9P41245 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp9P41245 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Mmp9P41245 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp9P41245 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Mmp9P41245 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 Gm37136-201ENSMUST00000194368 194 ntBASIC17.99■□□□□ 0.47
Mmp9P41245 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp9P41245 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp9P41245 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp9P41245 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp9P41245 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp9P41245 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.98■□□□□ 0.47
Mmp9P41245 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp9P41245 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms