Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BdnfP21237 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.76■□□□□ 0.91
BdnfP21237 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BdnfP21237 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BdnfP21237 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
BdnfP21237 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
BdnfP21237 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BdnfP21237 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.75■□□□□ 0.91
BdnfP21237 Terc-201ENSMUST00000082862 423 ntBASIC20.75■□□□□ 0.91
BdnfP21237 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BdnfP21237 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BdnfP21237 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BdnfP21237 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BdnfP21237 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.74■□□□□ 0.91
BdnfP21237 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BdnfP21237 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BdnfP21237 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BdnfP21237 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BdnfP21237 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BdnfP21237 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BdnfP21237 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BdnfP21237 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BdnfP21237 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BdnfP21237 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BdnfP21237 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BdnfP21237 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.72■□□□□ 0.91
BdnfP21237 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BdnfP21237 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BdnfP21237 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BdnfP21237 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.71■□□□□ 0.91
BdnfP21237 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BdnfP21237 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BdnfP21237 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
BdnfP21237 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BdnfP21237 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
BdnfP21237 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BdnfP21237 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BdnfP21237 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.69■□□□□ 0.9
BdnfP21237 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BdnfP21237 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BdnfP21237 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BdnfP21237 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BdnfP21237 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BdnfP21237 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
BdnfP21237 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
BdnfP21237 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.67■□□□□ 0.9
BdnfP21237 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BdnfP21237 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BdnfP21237 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BdnfP21237 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.66■□□□□ 0.9
BdnfP21237 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
BdnfP21237 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BdnfP21237 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
BdnfP21237 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BdnfP21237 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BdnfP21237 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.65■□□□□ 0.9
BdnfP21237 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BdnfP21237 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BdnfP21237 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.64■□□□□ 0.89
BdnfP21237 Gm6311-201ENSMUST00000073790 878 ntBASIC20.64■□□□□ 0.89
BdnfP21237 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BdnfP21237 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BdnfP21237 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BdnfP21237 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BdnfP21237 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BdnfP21237 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BdnfP21237 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BdnfP21237 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BdnfP21237 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BdnfP21237 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BdnfP21237 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BdnfP21237 Gm22567-201ENSMUST00000175542 342 ntBASIC20.62■□□□□ 0.89
BdnfP21237 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
BdnfP21237 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.62■□□□□ 0.89
BdnfP21237 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BdnfP21237 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BdnfP21237 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BdnfP21237 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BdnfP21237 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.61■□□□□ 0.89
BdnfP21237 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BdnfP21237 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BdnfP21237 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BdnfP21237 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
BdnfP21237 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BdnfP21237 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BdnfP21237 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BdnfP21237 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.6■□□□□ 0.89
BdnfP21237 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.6■□□□□ 0.89
BdnfP21237 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BdnfP21237 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.6■□□□□ 0.89
BdnfP21237 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.59■□□□□ 0.89
BdnfP21237 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BdnfP21237 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BdnfP21237 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BdnfP21237 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms