Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.71■■□□□ 1.39
Gm5580A0A0N4SVP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gm5580A0A0N4SVP8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Gm5580A0A0N4SVP8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gm5580A0A0N4SVP8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Gm5580A0A0N4SVP8 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.7■■□□□ 1.38
Gm5580A0A0N4SVP8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Gm5580A0A0N4SVP8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gm5580A0A0N4SVP8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Gm5580A0A0N4SVP8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm5580A0A0N4SVP8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Gm5580A0A0N4SVP8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm5580A0A0N4SVP8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm5580A0A0N4SVP8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm5580A0A0N4SVP8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Gm5580A0A0N4SVP8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Gm5580A0A0N4SVP8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.68■■□□□ 1.38
Gm5580A0A0N4SVP8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Gm5580A0A0N4SVP8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Gm5580A0A0N4SVP8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gm5580A0A0N4SVP8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Gm5580A0A0N4SVP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gm5580A0A0N4SVP8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gm5580A0A0N4SVP8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Gm5580A0A0N4SVP8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Gm5580A0A0N4SVP8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gm5580A0A0N4SVP8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gm5580A0A0N4SVP8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gm5580A0A0N4SVP8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Gm5580A0A0N4SVP8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.64■■□□□ 1.38
Gm5580A0A0N4SVP8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gm5580A0A0N4SVP8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm5580A0A0N4SVP8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Gm5580A0A0N4SVP8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Gm5580A0A0N4SVP8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.62■■□□□ 1.37
Gm5580A0A0N4SVP8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm5580A0A0N4SVP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.61■■□□□ 1.37
Gm5580A0A0N4SVP8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm5580A0A0N4SVP8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm5580A0A0N4SVP8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm5580A0A0N4SVP8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.6■■□□□ 1.37
Gm5580A0A0N4SVP8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm5580A0A0N4SVP8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm5580A0A0N4SVP8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm5580A0A0N4SVP8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm5580A0A0N4SVP8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Gm5580A0A0N4SVP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Gm5580A0A0N4SVP8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Gm5580A0A0N4SVP8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Gm5580A0A0N4SVP8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Gm5580A0A0N4SVP8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm5580A0A0N4SVP8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm5580A0A0N4SVP8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm5580A0A0N4SVP8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm5580A0A0N4SVP8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm5580A0A0N4SVP8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Gm5580A0A0N4SVP8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Gm5580A0A0N4SVP8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Gm5580A0A0N4SVP8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Gm5580A0A0N4SVP8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.54■■□□□ 1.36
Gm5580A0A0N4SVP8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm5580A0A0N4SVP8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms