Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 GGT3P-204ENST00000453783 1664 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 AP002414.2-201ENST00000591780 3365 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
LITAFQ99732 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LITAFQ99732 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.29□□□□□ -0.6
LITAFQ99732 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LITAFQ99732 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 AL355802.2-201ENST00000402069 882 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 DUX4L17-201ENST00000557360 1267 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC11.29□□□□□ -0.6
LITAFQ99732 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LITAFQ99732 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LITAFQ99732 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 AL135999.2-201ENST00000622438 1686 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 AC097374.2-201ENST00000618617 1306 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 LINC02447-202ENST00000501888 2146 ntBASIC11.29□□□□□ -0.6
LITAFQ99732 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.29□□□□□ -0.6
LITAFQ99732 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LITAFQ99732 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LITAFQ99732 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.28□□□□□ -0.6
LITAFQ99732 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.28□□□□□ -0.6
LITAFQ99732 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LITAFQ99732 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms