Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 SPDYE19P-201ENST00000338590 713 ntBASIC16.75■□□□□ 0.27
CLDN23Q96B33 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 MIR658-201ENST00000385210 100 ntBASIC16.75■□□□□ 0.27
CLDN23Q96B33 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN23Q96B33 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN23Q96B33 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AC073439.1-201ENST00000624121 1774 ntBASIC16.74■□□□□ 0.27
CLDN23Q96B33 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AC022210.1-201ENST00000449856 793 ntBASIC16.74■□□□□ 0.27
CLDN23Q96B33 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN23Q96B33 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLDN23Q96B33 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 AC093503.3-201ENST00000624917 2352 ntBASIC16.73■□□□□ 0.27
CLDN23Q96B33 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 WASH4P-201ENST00000564273 1246 ntBASIC16.73■□□□□ 0.27
CLDN23Q96B33 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 AC004790.1-201ENST00000612686 536 ntBASIC16.73■□□□□ 0.27
CLDN23Q96B33 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN23Q96B33 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN23Q96B33 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms